near the start of the movie, when cole first leaves the house to enter the church, malcom is sitting on a bench, looking over his notes, if you look carefully at his notes, you can see the words "i first met cole in a church" Malcom hasnt met cole in the church yet, that happens in the next scene.

the notes are more clear when malcom is translating the latin cole speaks, he writes "from the depths i cry to you oh lord" in the margin of the same notes