1. When McLaine and Zeus are climbing the rope down to the boat, and it unravels and hits the terrorist guy, it hits him vertically, so his body should be cut lengthwise (one leg, arm, etc. on each side). However, when they carry him away, one carries both legs, and the other both arms. The couldn't have been carrying both sides together, because they are next to each other.
2. When Zeus goes to Yankee Stadium, the tickets are for the home team dugout, which in Yankee Stadium is on the first base line. However, Zeus goes to the third base line, or the visitors dugout. Also, no one is allowed in the stadium until two-three hours before game time, and in the movie it was around 1-2PM. If there was a game before 7 Pm, it would have people in it.